CDS

Accession Number TCMCG023C26788
gbkey CDS
Protein Id PIN00441.1
Location join(11297..11468,12571..12671,13145..13222,13303..14250,15050..15112,15861..16061,16153..16263,16338..16499)
Organism Handroanthus impetiginosus
locus_tag CDL12_27053

Protein

Length 611aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01006971.1
Definition putative mRNA-associated protein RAP55 [Handroanthus impetiginosus]
Locus_tag CDL12_27053

EGGNOG-MAPPER Annotation

COG_category U
Description Scd6-like Sm domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K18749        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000932        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010603        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010606        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031086        [VIEW IN EMBL-EBI]
GO:0031087        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031334        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033962        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902115        [VIEW IN EMBL-EBI]
GO:1902117        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCGGAGAGTTCAACGACTGGGTCGACCAGTAGATCTGGCGGGGGCGGAGCGTCGGCGGACTCGTACATCGGCAGCTTGATTAGCTTGACATCGAAGAGTGAGATCAGGTACGAAGGCATACTCTACAACATCAACACTGAGGAGTCCAGCATCGGCTTGCGGAACGTGAGATCCTTTGGAACAGAAGGACGGAAGAAGGATGGCCCGCAAGTCCCTCCTAGCGACAAAATTTACGAATACATACTGTTTAGAGGAAGTGATATCAAGGATTTACAGGTTAAAGCTTCTCCACCTCCACCAGTTCAAACTGCACCACCCATAAACAGTGATCCTGCAATTATTCAGTCTCACTATCCCCGTCAAGCAACCCAGCCCACAAGTTTGCCCACAGCTTCTACCGGGCCGTTGGCGGATCTTGGTTCCCATTCTACTCAAATGGGCCTCTCTGGGTCAAATTTTCAAAGTGGTCTACCTTTATATCAACCTGGAGGAAACTTGAATTCTTGGGGCCCTTCTCCACCAAATGCAAATGGTAGTGGCTTAGCTATGCCAATGTATTGGCAGGGATTCTATGGCACACCTAATGGTCTTCCACAGCTGCCTCAACAATCTATGCTTCGACCACCTCCTGGCTTGTCAATTCCTCCTTCCATGCAGCAGATGCAATTTTCTGGTTTCAATTCATCTTTGCCAACAGGAGCATCCAGCCTGCCCAGTTCTAGTTTGCCAGATTATCATTCTTCTTTGGTTCCCAACAGCATGAGTTCTTCTAGTTTAACCTCTACCTCGTTAGCTGCTTCAACTTTGTCTTTGAATCTCCCACCTCTGCAGCCAGTATCACTAGCATCTGAAACTCCAGTCAATTTGCTGCCAAACAAAACTTCTATCTCTGCTCTCCCTGCATCGACACCTAGTGCTAGCTTGCCATCATCGGCTCCACTTTCTACTTCAGTTCCTGATAGTGCGGCAATACCTTCAGTTGCTAGTAAACCCAATGCTGTACCTGGTCCAGTTACCTTGCATCTGCAGAATGTATCTCTGCCAATGACGTCTGTTGCAGGGACATCTGGTTCTGTTCTTACAGAAACGCTGACACCTTCACTTATAACCCCAGGGCAGCTGCTGCAGTCTGGGCCATCTACTGCTTCTGCACCTCAACTTTTACAAACATCACAGAAGGATGTAGAAGTAGTTCAAGTGTCACCAAAACCGACATCAGAACCATCAGTCGCTGTGACAACAGAAGCTCAACCACCAATATTACCACTACCGCCAAATGCTAGAGCTCATAAGCCAAATGGAGGTGCTTATCACGTGCGTAACAATTATAGAGGGCGTGGTGGAAGAGGATTTGGGATGTCACGCCCTGTGACAAAATTCACTGAAGATTTTGATTTCACAGCAATGAATGAGAAATTCAAAAAGGATGAAGTGTGGGGTCATCTAGGAAAAAGCAATGGATCCCAATCTAAAGATAGAGAAGGAAATGGAAGTGGCAGTGATGAAGAAGATGCAGAGGACGAGGACGATGCTGAATTGCCTAAGATTGAGATCAAGCCTGTTTACAATAAGGATGACTTCTTCGACTCCCTTTCATGCAATGCCCTGGAAAACAACCCTAATCATGGAAGGACTAGGTATTCAGAGCAAATGAAGTTAGACACAGAGACATTTGGAGAGTTTTCAAGGTATCGTGGTGGTCGAGGAGGTCGTGGACCAGGTCGCGGTGGTGGTCGGTTCCGTGGCTCTTACTATGGAAGAGGAGGTTATGGTGGATATGGCTATTCGGGCAGGGGCCGTGGCCGAGGTGCGCCGAATCGTTCTTCCTAG
Protein:  
MAAESSTTGSTSRSGGGGASADSYIGSLISLTSKSEIRYEGILYNINTEESSIGLRNVRSFGTEGRKKDGPQVPPSDKIYEYILFRGSDIKDLQVKASPPPPVQTAPPINSDPAIIQSHYPRQATQPTSLPTASTGPLADLGSHSTQMGLSGSNFQSGLPLYQPGGNLNSWGPSPPNANGSGLAMPMYWQGFYGTPNGLPQLPQQSMLRPPPGLSIPPSMQQMQFSGFNSSLPTGASSLPSSSLPDYHSSLVPNSMSSSSLTSTSLAASTLSLNLPPLQPVSLASETPVNLLPNKTSISALPASTPSASLPSSAPLSTSVPDSAAIPSVASKPNAVPGPVTLHLQNVSLPMTSVAGTSGSVLTETLTPSLITPGQLLQSGPSTASAPQLLQTSQKDVEVVQVSPKPTSEPSVAVTTEAQPPILPLPPNARAHKPNGGAYHVRNNYRGRGGRGFGMSRPVTKFTEDFDFTAMNEKFKKDEVWGHLGKSNGSQSKDREGNGSGSDEEDAEDEDDAELPKIEIKPVYNKDDFFDSLSCNALENNPNHGRTRYSEQMKLDTETFGEFSRYRGGRGGRGPGRGGGRFRGSYYGRGGYGGYGYSGRGRGRGAPNRSS